基因表达谱芯片数据分析
芯片质量控制(Quality control,QC)原始数据的标准化(Raw data normalization)背景噪声校正(Background correction)
芯片内标准化(Within-array normalization)
片间标准化(Between-array normalization)
芯片内标准化(Within-array normalization)
片间标准化(Between-array normalization)
筛查差异表达基因基于SAM (Significance Analysis of Microarray)
基于EBAM (Empirical Bayes Analysis of Microarray)
基于t-test and Multiple testing corrections
基于EBAM (Empirical Bayes Analysis of Microarray)
基于t-test and Multiple testing corrections
聚类分析(clustering Analysis)层次聚类(Hierarchical clustering)
K均值聚类 (K means clustering)
自组织图聚类(SOM clustering)
K均值聚类 (K means clustering)
自组织图聚类(SOM clustering)
生物标志物和标志谱鉴定(Biomarker and profile analysis) 主成分分析 (Principle Component Analysis)
机器学习算法(Machine learning algorithm)
遗传算法(Genetic algorithm)
相关性分析(Association study)
机器学习算法(Machine learning algorithm)
遗传算法(Genetic algorithm)
相关性分析(Association study)
差异表达基因的功能和信号通路分析(Function and Pathway Analysis)基因本体论分析(Gene Ontology GO analysis)
基因功能集合富集度分析 (Gene Set Enrichment Analysis, GSEA)
基于通路数据库的知识挖掘分析 (Mining based on pathway knowledge)
基于染色体定位的表达分析 (Gene expression map based on genome)
基于转录因子结合位点(TFBS)以及microRNA靶基因的表达谱富集分析
基因功能集合富集度分析 (Gene Set Enrichment Analysis, GSEA)
基于通路数据库的知识挖掘分析 (Mining based on pathway knowledge)
基于染色体定位的表达分析 (Gene expression map based on genome)
基于转录因子结合位点(TFBS)以及microRNA靶基因的表达谱富集分析
绘制基因组表达图谱(Gene expression map based on genome)
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